2018-02-13T11:49:46.000Z2025-05-29 11:57:36
description
similar to polyribonucleotide nucleotidyltransferase
similar to the C-terminal domain of E. coli polyribonucleotide phosphorylase and to four repeated domains at the N-terminus of E. coli ribosomal protein S1
locus
BSU00630
BSU_00630
geneLength
384
387
outlinks
bsu
BSU00630
BSU_00630
Gene
Coordinates
69,626 → 70,012
69,626 70,012
The protein
Protein family
S1 motif domain (according to Swiss-Prot)
Peptidase U57 family (together with [[protein|YabG]]) (according to UniProt)
The protein
Paralogous protein(s)
[[protein|YugI]] (51%)
[[this]]
Biological materials
Mutant
MGNA-B919 (yabR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1918 NBRP B. subtilis, Japan]
BKE00630 (Δ[[gene|yabR]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE00630 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAAAAAGTGCTCCTCC, downstream forward: _UP4_TAACTTGCTGCTTTCTATAA
BKK00630 (Δ[[gene|yabR]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK00630 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAAAAAGTGCTCCTCC, downstream forward: _UP4_TAACTTGCTGCTTTCTATAA
MGNA-B919 (yabR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1918 NBRP B. subtilis, Japan]
BKE00630 ([[gene|yabR]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE00630 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAAAAAGTGCTCCTCC, downstream forward: _UP4_TAACTTGCTGCTTTCTATAA
BKK00630 ([[gene|yabR]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK00630 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAAAAAGTGCTCCTCC, downstream forward: _UP4_TAACTTGCTGCTTTCTATAA
References
The protein
[SW|Domains]
[SW|S1 domain] (aa 4 ... 74) (according to the Interpro database)
The protein
Structure
[PDB|2K4K] ([[protein|YugI]], 51% identity from aa 3 ... 91) [pubmed|19152054]